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Fig. 3 | BMC Bioinformatics

Fig. 3

From: AceTree: a major update and case study in the long term maintenance of open-source scientific software

Fig. 3

An overview of the new 3-dimensional viewing window. Rules can color cells based on a broad array of search criteria including adult neuronal connectivity. The ‘Coloring Layers’ show the presynaptic and electrical connections of the amphid neuron ASGL and the head neuron URYVL. Color striping indicates that multiple rules apply to the striped entity. Here, the stripes on ASGL and URYVL indicate the wiring relationships between them in the adult. The ‘Display Options’ tab provides a key for the model annotations (right). Other searched criteria that can be used include lineage name, functional name, ancestry, and gene expression

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