Fig. 5

Distribution of logD^S/D^N and baseline segments. a The green and blue points together are the segments without LOH, the blue points are the baseline segments selected by MixClone, The blue line in each sub-figure is the average value of \({D_{j}^{S}}/{D_{j}^{N}}\) of baseline segments. b The green and blue points together are the segments with no LOH and B allele frequencies around 0.5, the red points are the baseline segments selected by Pre-SCNAClonal. The red line in each sub-figure is the average value of logD^S/D^N of baseline segments. All the points in this figure are plotted by ggplot2 R package with opacity parameter α=0.05