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Table 5 Correction power and accuracy of seven methods over C.elegans dataset (100.2Mb genome, 110bp read length)

From: An efficient error correction algorithm using FM-index

 

Corrected bases (bp)

Corrected length (bp)

Identity (%)

Indel rate (10−5)

Raw data

7376.84 Mbp

109.32

99.54%

14.91

Coral

7389.51 Mbp

109.34

90.70%

15.47

Karect

7041.49 Mbp

109.49

99.79%

13.93

FMOE

7411.06 Mbp

109.57

99.78%

12.45

QuorUm

7402.77 Mbp

109.24

99.8%

11.64

RACER

7429.30 Mbp

109.61

99.85%

10.69

BLESS2

7407.09 Mbp

109.44

99.86%

8.9

SGA

7420.71 Mbp

109.58

99.83%

11.71