Table 6 Biclusters in each method that match with PAM50
From: Analysis of breast cancer subtypes by AP-ISA biclustering
PAM50 | AP-ISA | ISA | LAS | CC | SparseBC | SSVD |
|---|---|---|---|---|---|---|
Basal-like | 4 | 5 | 1, 10 | 5, 7 | 3 | – |
ERBB2+ | 3 | 6 | 8 | – | – | – |
LuminalA | 5, 6, 9 | 1, 4 | 2, 3, 7 | 1 | 4, 6 | – |
LuminalB | 5, 7 | – | 3 | – | 1, 4 | – |
Normal-like | 1 | 2 | 2, 6 | 1 | 7 | – |