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Table 4 Data processing of all gene expression datasets

From: dbMDEGA: a database for meta-analysis of differentially expressed genes in autism spectrum disorder

Dataset

Chip Type

Data Processing

R Package

Human

 GSE28475

Illumina

Quantile normalization and log2 transformation

lumi

 GSE28521

Illumina

Quantile normalization and log2 transformation

lumi

 GSE28521

Illumina

Quantile normalization and log2 transformation

lumi

Mouse

 GSE62594

Agilent

Quantile normalization and log2 transformation

limma

 GSE51612

Agilent

Quantile normalization and log2 transformation

limma

 GSE40630

Affymetrix

RMA

affy

 GSE47150

Affymetrix

RMA

affy

 GSE32012

Affymetrix

RMA

affy