Skip to main content
Fig. 2 | BMC Bioinformatics

Fig. 2

From: Usability of human Infinium MethylationEPIC BeadChip for mouse DNA methylation studies

Fig. 2

Genomic distribution and annotation of mEPIC probes. a Genomic distribution of mEPIC probes across mouse chromosomes. Bar width illustrates chromosome size. b Barplot illustrating that only few mEPIC probes map per mm10.refSeq gene. 16 ≤ 43: counts number of annotated mm10.refSeq genes with ≥16 and ≤43 mEPIC probes. c Barplot of genomic features (Gene region, CpG context and FANTOM5 enhancers), probe design (type I and II), validated (detection P-value < 0.01) and total mEPIC probes. Rounded rectangles enclose features, which add up to the total number of identified mEPIC probes (#19,420) d Overview of annotations included in the “mEPICmanifest” in Additional file 2. Mm10: Mus musculus genome build 10, CHR: Chromosome, CGI: CpG island

Back to article page