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Table 5 Summary of over-represented GO terms (molecular function) in each subset of E.coli data

From: Partitioning of functional gene expression data using principal points

Subset4
(339/402, 84%)
Transposition 26 3.10E-12
Category
(Annotated / Total, %)
Term Count p-value
Subset1
(932/1320, 70%)
DNA recombination 49 8.80E-06
RNA-binding 58 2.00E-04
Transposition 31 2.60E-04
Protein biosynthesis 26 3.60E-04
Transposable element 31 3.90E-04
tRNA-binding 16 7.90E-04
DNA-binding 159 1.70E-03
tRNA processing 26 2.90E-03
Nucleotide-binding 180 2.90E-03
ATP-binding 155 2.90E-03
Cytoplasm 232 4.30E-03
Nucleotidyltransferase 23 6.90E-03
Subset2
(188/248, 75%)
Acetylation 21 6.20E-07
Purine biosynthesis 9 2.10E-06
Oxidoreductase 43 6.10E-06
Nitrate assimilation 8 6.50E-05
Metal-binding 59 2.40E-04
Ligase 15 9.20E-04
Tricarboxylic acid cycle 7 1.40E-03
Pyridoxal phosphate 11 2.20E-03
NADP 14 2.30E-03
Pyrimidine biosynthesis 5 2.90E-03
Enterobactin biosynthesis 4 6.10E-03
Transferase 48 8.80E-03
Subset3
(609/1377, 44%)
Oxidoreductase 137 5.80E-03
Iron-sulfur 58 7.40E-03
Subset4
(339/402, 84%)
Transposition 26 3.10E-12
Transposable element 26 5.20E-12
DNA recombination 29 6.30E-09
Cytoplasm 96 2.80E-06
Ribonucleoprotein 16 2.00E-04
Bacterial flagellum 9 2.90E-04
Ribosomal protein 15 5.70E-04
Transmembrane beta strand 13 6.00E-04
RNA-binding 24 9.80E-04
DNA replication 12 1.20E-03
Cell outer membrane 18 2.30E-03
Ion transport 21 3.20E-03
Bacterial flagellum biogenesis 7 3.60E-03
rRNA processing 10 4.50E-03
Methyltransferase 13 7.40E-03