Table 1 Mean ROC and ROC50 scores of various methods on the SCOP benchmark dataset (Eq. 1)
From: Protein remote homology detection based on bidirectional long short-term memory
Methods | Mean ROC | Mean ROC50 | classifier |
|---|---|---|---|
GPkernel | 0.902 | 0.591 | SVM |
GPextended | 0.869 | 0.542 | SVM |
GPboost | 0.797 | 0.375 | SVM |
SVM-Pairwise | 0.849 | 0.555 | SVM |
Mismatch | 0.878 | 0.543 | SVM |
eMOTIF | 0.857 | 0.551 | SVM |
LA-kernel | 0.919 | 0.686 | SVM |
PSI-BLAST | 0.575 | 0.175 | NA |
LSTM | 0.943 | 0.735 | LSTM |
ProDec-BLSTM | 0.969 | 0.849 | LSTM |