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Table 2 Accuracy (measured as number of back edges) of discussed algorithms for different model parameters

From: Inferring transposons activity chronology by TRANScendence – TEs database and de-novo mining tool

No. Families

Mean

Noise

No. Edges

Original order

quasi-topological

hillClimbing

200

50

25%

4608

763

943

743

200

50

50%

6137

1502

1763

1444

200

100

50%

18289

4514

5266

4521

300

100

15%

21026

2437

3242

2480

300

100

25%

24255

4063

5073

4102

300

100

50%

32323

8086

9184

8075

500

200

15%

98521

11324

13876

11534