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Fig. 4 | BMC Bioinformatics

Fig. 4

From: XBSeq2: a fast and accurate quantification of differential expression and differential polyadenylation

Fig. 4

Benchmark of different methods under low level of background noise. Benchmark of DESeq2, edgeR, XBSeq, XBSeq2 in terms of computation time (a); and total number of computational memory allocated (b). Methods were benchmarked with datasets of 3, 5, or 10 number of replicates per condition, 10% DEGs with 1.5-fold change. Benchmark procedure was carried out under MacBook Pro, 2.7 GHz Intel Core i5, 8 GB 1867 MHz DDR3

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BMC Bioinformatics

ISSN: 1471-2105

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