Skip to main content
Fig. 3 | BMC Bioinformatics

Fig. 3

From: Genetic sequence-based prediction of long-range chromatin interactions suggests a potential role of short tandem repeat sequences in genome organization

Fig. 3

‘AMPD’ visualization of the informative K-mer pairs from the predictor for region 9 in GM12878 (Refer Table 1 for region details). Top: At distances in {0,…,100} basepairs, the 3-mer pair that maximally contributes towards positive and negative classification of a given locus is shown. Weights are shown on the horizontal axis, distances on the vertical axis. Bottom: ‘AMPD’ visualization for the 5-mer case

Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us