Fig. 2

PacBio read lengths and quality scores. This figure shows the lengths (in a) and qualities (in b) of the input and aligned read with the Meta-aligner. In this figure, three set of results are presented: (1) Only alignment stage of Meta-aligner with (ℓ ₁,d)=(25,1) and no slide (76.54% of reads are aligned), (2) Only alignment stage of Meta-aligner with \(\left (\ell _{1}, d, \mathcal {S}_{1}\right)=\left (25, 2, 5\right)\) (87.04% of reads are aligned), and (3) Two first steps of Meta-aligner with \(\left (\ell, d, \mathcal {S}_{1}\right)=\left (25, 2, 5\right)\) (97.97% of reads are aligned)