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Table 2 Table showing the user time in seconds taken for each program to process a set of libraries

From: BATVI: Fast, sensitive and accurate detection of virus integrations

Library

VirusSeq

Virusfinder 2

BatVI

145T.170

139063.09

10681.89

1068.59

145T.800

142839.84

9708.24

1818.19

174T.170

138189.30

8404.97

347.36

174T.800

174110.80

11255.71

895.41

182T.170

138965.89

10423.38

397.17

182T.800

143127.62

12803.67

321.79

186T.170

119893.79

10519.19

221.69

186T.800

121806.51

11444.95

220.89

23T.170

118660.10

10662.88

457.60

23T.800

116794.80

11226.10

517.36

266T.170

118169.59

10419.90

344.68

266T.800

96608.79

9852.84

240.10

32T.170

178890.78

9734.77

271.37

32T.800

139353.66

8969.77

231.51

32T.800

139353.66

8969.77

231.51

  1. The libraries are sub-samplings of real life data. The libraries with suffix 170 have an average insert size of 170 bp while those with the suffix 800 have an average insert size of 800 bp