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Table 2 Quantitative evaluation of the four copy number variant detection methods based on clustering of single-cell sequencing data from 100 cells

From: nbCNV: a multi-constrained optimization model for discovering copy number variants in single-cell sequencing data

Methods

Classification error count

 

cluster 1

cluster 2

cluster 3

CNVnator

0

6

0

nbCNV

0

5

0

control-FREEC

0

10

0

poiCNV

0

5

0