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Table 1 Overview of the mock sequencing data discussed in this work. It contains information on the amplified regions, samples ID’s, number of paired-end reads (i.e. contigs), average contig length (i.e. length after merging both paired-end reads), and average length of the overlapping part between both paired-end reads

From: IPED: a highly efficient denoising tool for Illumina MiSeq Paired-end 16S rRNA gene amplicon sequencing data

Name

Region

length

Overlap

ID

#contigs

MOCK1 [5]

V34

430

70

130401

184216

130403

131241

130417

102547

V4

250

250

130422

79701

130401

1217529

130403

1191998

V45

375

125

130417

1015673

130422

871118

130401

826262

MOCK2 [22]

V4

250

250

v4.I.1

213043

v4.I.05

240682

V45

390

110

v4.v5.I.1

2484

v4.v5.I.11

90126

MOCK3 (SRP066114)

V34

421

140

M1

35168

M2

60488

M3

21723