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Table 8 Error rates in real PhiX DNA data using shadow linear regression and smoothing spline approaches

From: Empirical estimation of sequencing error rates using smoothing splines

Samples

SRER

EER_CS

EER_RS

100217

0.0261

0.0317

0.0315

100514

0.0142

0.0155

0.0157

  1. SRER error rate estimated using shadow regression
  2. EER_CS empirical error rate estimated using cubic smoothing spline
  3. EER_RS empirical error rate estimated using robust smoothing spline