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Table 3 Hydrophobic contacts between muscarinic M3 receptor and NS5A, with corresponding amino-acid residues, highlighted atoms and distances and angles between them

From: Common molecular mechanism of the hepatic lesion and the cardiac parasympathetic regulation in chronic hepatitis C infection: a critical role for the muscarinic receptor type 3

Muscarinic M3 receptor (atom)

NS5A (atom)

Distance/Å

Bond angles/degrees (atoms)

ILE 70 (CB)

PHE 127 (CG-CD1-CD2-CE1-CE2-CZ centroid)

3.668

31.747 (ILE70 (CB)—PHE127 (centroid)—PHE 127 (CD1))

TYR 524 (CG-CD1-CD2-CE1-CE2-CZ centroid)

CYS 190 (SG)

4.601

21.30 (TYR 254 CZ-TYR 254 centroid—CYS 190(SG))

LEU 527 (CG)

PRO 189 (CB-CG-CD centroid)

5.244

133.20 (LEU 527(CG)—PRO 189(CA)—PRO 189(centroid)

ILE 534 (CG)

LEU 183 (CG)

4.326

48.88 ILE 534 (CG)—LEU 183 (CD2)—LEU 183(CG)

ILE 508 (CG)

LEU 179 (CG)

4.994

72.54 ILE 508 (CG)—LEU 179 (CD2)—LEU 179 (CG)

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BMC Bioinformatics

ISSN: 1471-2105

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