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Table 9 Modularity, Q, of PPI subnetworks detected by different module detection algorithms

From: Comparison of module detection algorithms in protein networks and investigation of the biological meaning of predicted modules

Experimental type

\(D_{M_{pearson}}\phantom {\dot {i}\!}\)

\(D_{M_{spearman}}\phantom {\dot {i}\!}\)

\(D_{{sp}_{pearson}}\phantom {\dot {i}\!}\)

\(D_{sp_{spearman}}\phantom {\dot {i}\!}\)

Fast greedy

Label propogation

Multilevel

Spinglass

Walktrap

Affinity chromatography

0.057

0.027

0.079

0.078

0.319

0.0004

0.352

0.372

0.221

Two hybrid

0.424

0.418

0.371

0.368

0.456

0.0030

0.495

0.508

0.406

Biochemical

0.572

0.575

0.515

0.527

0.529

0.0715

0.585

0.611

0.512

Pull down

0.535

0.424

0.450

0.446

0.649

0.5650

0.666

0.676

0.569

  1. The bold values in show two highest modularities of the modules predicted by module detection algorithms