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Table 13 CORUM complexes which are enriched to more than one modules predicted by spinglass and multilevel community detectin algorithms

From: Comparison of module detection algorithms in protein networks and investigation of the biological meaning of predicted modules

Common CORUM complexes

Affinity chromatography technology

Algorithm

Name

Multilevel

55S ribosome, mitochondrial

Spinglass

RNA polymerase II complex, chromatin structure modifying

Two hybrid

Multilevel

C complex spliceosome

Spinglass

-

Biochemical

Multilevel

-

Spinglass

-

Pull down

Multilevel

PA700-20S-PA28 complex

 

BRCA1-RNA polymerase II complex

 

Spliceosome

 

18S U11/U12 snRNP

 

C complex spliceosome

 

17S U2 snRNP

Spinglass

RNA polymerase II holoenzyme complex

 

BRCA1-RNA polymerase II complex"

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BMC Bioinformatics

ISSN: 1471-2105

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