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Table 1 A list of protein networks used for detecting communities by different community detection algorithms

From: Comparison of module detection algorithms in protein networks and investigation of the biological meaning of predicted modules

Tax id

Biological

No. of

No. of

Edge

 

Name

vertices

interactions

density

10090

House mouse

5057

11560

0.000904

10116

Norway rat

1710

2582

0.001767

237561

Candida albicans SC5314

304

316

0.006860

284812

Schizosaccharomyces pombe 972h

3854

55054

0.007414

36329

Plasmodium falciparum 3D7

1172

2415

0.003519

3702

Arabidopsis Thaliana

7103

17752

0.000703

559292

Saccharomyces cerevisiae S288c

6008

227836

0.012620

6239

Caenorhabditis elegans

3701

7695

0.001123

7227

Drosophila melanogaster (fruit fly)

8017

38973

0.001212

9606

Homo sapiens

15795

159278

0.001276