Table 1 Average substitution rates for GAII, HiSeq and MiSeq. Substitution rates (∈ [0,1], errors per base) are split according to the original nucleotide
From: Illumina error profiles: resolving fine-scale variation in metagenomic sequencing data
Platform | R1/R2 | A | C | G | T |
|---|---|---|---|---|---|
GAII | R1 | 0.0015 | 0.0010 | 0.0008 | 0.0018 |
GAII | R2 | 0.0035 | 0.0029 | 0.0019 | 0.0026 |
HiSeq | R1 | 0.0004 | 0.0004 | 0.0004 | 0.0008 |
HiSeq | R2 | 0.0007 | 0.0007 | 0.0007 | 0.0012 |
MiSeq | R1 | 0.0012 | 0.0009 | 0.0009 | 0.0012 |
MiSeq | R2 | 0.0033 | 0.0021 | 0.0015 | 0.0031 |