Cutoff value | CEU | YRI | CHB | |
---|---|---|---|---|
Without prior population information for Hapmap samples | ||||
0.9 | PCA Scores | 17520/16329/16325 | 64/62/55 | 740/721/719 |
0.8 | PCA Scores | 18016/17928/17928 | 175/165/159 | 773/768/767 |
0.7 | PCA Scores | 18171/18122/18122 | 266/263/260 | 799/796/796 |
With prior population information for Hapmap samples | ||||
0.9 | PCA Scores | 17510/16329/16321 | 69/62/59 | 743/721/719 |
0.8 | PCA Scores | 18017/17928/17928 | 174/165/159 | 774/768/768 |
0.7 | PCA Scores | 18167/18122/18121 | 267/263/260 | 799/796/796 |