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Table 1 Sequence segment data set list for ubiquitination site prediction

From: Computational methods for ubiquitination site prediction using physicochemical properties of protein sequences

Data Set #

Number of Segments

Data Sources

 

All

With

With Non-

  

Ubiquitination Central K Site

1

300

150

150

[4] - http://iclab.life.nctu.edu.tw/ubipred/

2

6838

3419

3419

[15] (Independent Set) - http://protein.cau.edu.cn/cksaap_ubsite/download/DatasetForhCKSAAP_UbSite.rar

3

12236

6118

6118

[15] (Training Set) - http://protein.cau.edu.cn/cksaap_ubsite/download/DatasetForhCKSAAP_UbSite.rar

4

4608

263

4345

[14] - DOI: 10.1371/journal.pone.0022930.s001

5

3651

131

3520

[11] - http://www.ubpred.org/UbPred_DataSets.zip

6

676

37

639

[14] - DOI: 10.1371/journal.pone.0022930.s003