Table 6 Processing time improvements for two rounds of MetaCRAM on the SRR359032 dataset (5.4 GB, without removing redundancy in description lines) resulting from parallelization of assembly and compression
From: MetaCRAM: an integrated pipeline for metagenomic taxonomy identification and compression
Time | Without parallelization | With parallelization | Reduction (%) |
|---|---|---|---|
Real | 235 m 40 s | 170 m 4 s | 27.7 |
User | 449 m 40 s | 346 m 33 s | 22.9 |
System | 14 m 13 s | 8 m 45 s | 40.1 |