Skip to main content

Table 4 PROCHECK parameters. PROCHECK parameters used in AIDE. The G-factor, which is a log-odds score based on the observed distributions of stereochemical parameters, provides a measure of how "normal", or alternatively how "unusual", a given stereochemical property is.

From: Validation of protein models by a neural network approach

Parameter

Percentage of residue in Ramachandran plot core regions

Percentage of residue in Ramachandran plot allowed regions

Percentage of residue in Ramachandran plot generously allowed regions

Percentage of residue in Ramachandran plot disallowed regions

Number of bad contacts

G-factor for dihedral angles

G-factor for covalent bonds

Overall G-factor