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Table 4 Performance of cascade SVM classifier for the independent dataset I and II sequences.

From: VirulentPred: a SVM based prediction method for virulent proteins in bacterial pathogens

 

Independent Dataset I

Independent Dataset II

  

Bordetella

Campylobacter

Listeria

Neisseria

Haemophilus

Overall

Sensitivity (%)

82.5 (33)

77.8 (21)

79.5 (31)

73.3 (11)

84.0 (21)

85.7 (30)

80.9 (114)

Specificity (%)

81.4 (35)

81.5 (22)

80.0 (32)

88.2 (15)

70.8 (17)

80.0 (28)

79.7 (114)

Accuracy (%)

81.9 (68)

79.6 (43)

79.8 (63)

81.3 (26)

77.6 (38)

82.9 (58)

80.3 (228)

  1. Values in parenthesis correspond to the number of true hits obtained.