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Figure 10 | BMC Bioinformatics

Figure 10

From: Can molecular dynamics simulations help in discriminating correct from erroneous protein 3D models?

Figure 10

Superposition of the initial DT2 model for the all-α class, in cyan, with the new DT2 model, in red for the unmodified parts and yellow for the modelled loops. These 2 models differ in their coverage with respect to the template structure, 100% for the initial model and only 86% for the new model. Unaligned residues in the loops have been built with Modeller. They are shown in yellow. This figure was made with VMD [37].

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