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Table 1 Frequencies of location and orientation bias in motif-experiment pairs

From: Genome-scale study of the importance of binding site context for transcription factor binding and gene regulation

Data

nr of pairs examined

location bias

orientation bias

any bias

DNA binding

280

113 (40%)

0 (0%)

113 (40%)

DNA binding (only unique promoters)

105

42 (40%)

2 (2%)

42 (40%)

co-expression

23

15 (65%)

5 (22%)

15 (65%)