Table 4 Results of the block method on the same physical region with different densities and different missing data imputing methods.
From: Generating samples for association studies based on HapMap data
Dataset | Original | Block | ||||
|---|---|---|---|---|---|---|
# SNPs | # blocks | avg len | # blocks | avg len | overlap | |
Phase I | 1157 | 42 | 19.14 | 67.3 | 12.21 | 97.2% |
Phase I (nr) | 441 | 38 | 6.29 | 53.2 | 4.85 | 96.2% |
ALS | 165 | 25 | 4.92 | 23.2 | 5.2 | 94.4% |
Phase I (nr, nLD) | 441 | 38 | 6.29 | 30.8 | 7.25 | 71.4% |