Skip to main content
Figure 2 | BMC Bioinformatics

Figure 2

From: Evaluation of phylogenetic footprint discovery for predicting bacterial cis-regulatory elements and revealing their evolution

Figure 2

LexA binding motifs experimentally characterized in different taxonomic groups. Gamma-proteobacteria [36, 74, 75]; Xanthomonadales [46]; Alpha-proteobacteria [76, 41]; Delta-proteobacteria [77]; Cyanobacteria [78]; Gram-positives [48, 79, 80]. Sequence logos were generated with Weblogo [81] from the alignment of the annotated sites. The E. coli sequence logo was obtained from annotated sites in RegulonDB [82, 43].

Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us