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Table 4 Cross-classification of sample type with clusters obtained from HOPACH

From: Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions

Class

bladder

blood (ad)

blood (nb)

brain

cervical

H & N

kidney

lung

placenta

pleura

sm intestine

Total

1

 

30

   

1

     

31

2

  

55

        

55

3

   

10

       

10

4

   

2

1

10

     

13

5

5

   

2

 

6

53

 

18

5

89

6

        

1

  

1

7

        

16

  

16

8

        

1

  

1

9

        

1

  

1

Total

5

30

55

12

3

11

6

53

19

18

5

217

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BMC Bioinformatics

ISSN: 1471-2105

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