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Table 1 LOOCV and independent genotyping accuracies

From: Identifying a few foot-and-mouth disease virus signature nucleotide strings for computational genotyping

  

A

O

C

Asia1

SAT1

SAT2

SAT3

 

A

O

C

Asia1

SAT1

SAT2

SAT3

 

129

47

49

8

9

10

3

3

83

6

31

16

26

1

2

1

A

47

47

      

6

6

      

O

48

 

48

     

31

 

31

     

C

8

  

8

    

16

  

16

    

Asia1

9

   

9

   

26

   

26

   

SAT1

9

    

9

  

1

    

1

  

SAT2

4

 

1

   

3

 

2

     

2

 

SAT3

4

    

1

 

3

1

      

1

  1. The composition of the different serotype FMDV strains in our two datasets (columns 2 and 10). The LOOCV genotype prediction results on the first dataset are in row 2 from columns 3 to 9 and more details in rows 3–9 and columns 3–9 as a confusion matrix; the independent testing results on the second dataset are in row 2 from columns 11–17 and more details in rows 3–9 and columns 11–17 as a confusion matrix. Numbers in bold denote the correct genotype predictions.
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BMC Bioinformatics

ISSN: 1471-2105

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