Skip to main content

Table 3 Twenty pairs of finished Medicago truncatula BACs with obvious sequencing errors detected by ClustDB

From: Simultaneous identification of long similar substrings in large sets of sequences

type

upstream

downstream

type

upstream

downstream

1

AC136973

AC146774

1

AC151621

AC127168

1

AC143339

AC160629

1

AC153460

AC137837

1

AC174291

AC166286

1

AC170800

AC141922

1

AC174299

AC152886

1

AC147013

AC138010

1

AC148097

AC140551

2

AC135234

AC149208

2

AC138526

AC148775

1

AC144476

AC147431

2

AC125474

AC121246

1

AC174378

AC150647

3

AC142394

AC147435

1

AC148347

AC135229

1

AC138017

AC135800

1

AC140720

AC147000

1

AC135800

AC157757

1

AC147000

AC136142

  1. The two columns named 'type' denote the kind of the problem as described in the section "Testing ClustDB on TIGR's current Medicago BAC assembly". The first case is depicted in Figure 2.