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Table 4 Proportion of good quality MACS and mean norMD

From: Blast sampling for structural and functional analyses

 

MACS

init

mm

sdm

sm

rm

 

Good quality MACS (%)

79

83

77

95

75

subset-100 (91 seq.)

norMD ≥ 0.3 (%)

95

100

98

99

99

 

mean norMD*

0.78

0.93

0.95

0.86

0.96

 

Standard deviation*

0.42

0.34

0.51

0.41

0.38

subset100–500 (114 seq.)

norMD ≥ 0.3 (%)

68

92

83

96

82

 

mean norMD*

0.51

0.56

0.55

0.63

0.60

 

Standard deviation*

0.20

0.20

0.17

0.20

0.30

subset+500 (79 seq.)

norMD ≥ 0.3 (%)

78

49

43

89

37

 

mean norMD*

0.49

0.46

0.45

0.53

0.47

 

Standard deviation*

0.16

0.11

0.10

0.10

0.17

  1. * considering only good quality MACS