From: Characterization and simulation of cDNA microarray spots using a novel mathematical model
Spot shape | x 0 | K | a | K V | MSD*** | |
---|---|---|---|---|---|---|
doughnut | 1 | 138.07 | 2.86E-3 | -0.89 | 0.21 | 3.72E-2 |
 | 2 | 144.76 | 1.73E-3 | -0.74 | 0.30 | 1.08E-2 |
 | 3 | 198.19 | 1.68E-3 | -0.65 | 0.48 | 1.70E-2 |
 | 4 | 294.20 | 3.01E-3 | -0.26 | 0.36 | 2.60E-2 |
 | 5 | 367.35 | 3.88E-3 | -0.37 | 1.10 | 2.77E-2 |
 | mean | 228.51 | 2.63E-3 | -0.58 | 0.49 | 2.37E-2 |
 | SD** | 99.63 | 9.31E-4 | 0.26 | 0.35 | 1.02E-2 |
volcano | 1 †| 41.02 | 1.78E-2 | -0.14 | 1.35 | 2.43E-2 |
 | 2 †| 433.28 | 6.11E-2 | -0.08 | 1.68 | 7.35E-3 |
 | 3 †| 467.53 | 2.24E-3 | -0.17 | 2.96 | 6.77E-3 |
 | 4 ††| 60.19 | 4.40E-3 | -0.18 | 2.60 | 1.09E-2 |
 | 5 ††| 62.10 | 6.17E-3 | -0.01 | 1.59 | 1.43E-2 |
 | mean | 212.82 | 1.83E-2 | -0.12 | 2.04 | 1.27E-2 |
 | SD** | 217.38 | 2.46E-2 | 0.07 | 0.70 | 7.14E-3 |
peak | 1 | 56.92 | 1.59E-3 | 0.28 | 3.51 | 2.69E-3 |
 | 2 | 69.96 | 1.68E-4 | 0.31 | 3.02 | 2.36E-3 |
 | 3 | 58.17 | 5.02E-4 | 0.38 | 2.44 | 1.55E-3 |
 | 4 | 60.20 | 3.81E-4 | 0.73 | 1.75 | 1.92E-3 |
 | 5 | 52.05 | 4.66E-4 | 0.35 | 2.39 | 9.64E-4 |
 | mean | 59.46 | 6.22E-4 | 0.41 | 2.62 | 1.90E-3 |
 | SD** | 6.59 | 5.59E-4 | 0.19 | 0.67 | 6.78E-4 |