From: Characterization and simulation of cDNA microarray spots using a novel mathematical model
Spot shape | x 0 | K | a | K V | MSD*** | |
---|---|---|---|---|---|---|
doughnut | 1 | 101.06 | 5.67E-3 | -0.40 | 1.74 | 3.01E-2 |
 | 2 | 540.79 | 6.35E-3 | -0.77 | 0.41 | 4.58E-3 |
 | 3 | 635.04 | 7.35E-3 | -0.47 | 0.71 | 2.71E-2 |
 | 4 | 686.56 | 5.66E-3 | -0.51 | 0.44 | 5.24E-3 |
 | 5 | 777.05 | 2.73E-3 | -0.56 | 0.64 | 1.69E-2 |
 | mean | 548.10 | 5.55E-3 | -0.54 | 0.79 | 1.68E-2 |
 | SD** | 264.12 | 1.72E-3 | 0.14 | 0.55 | 1.19E-2 |
volcano | 1 †| 599.58 | 2.76E-3 | -0.55 | 2.45 | 8.12E-4 |
 | 2 †| 265.87 | 1.61E-3 | 0.70 | 2.82 | 8.96E-3 |
 | 3 †| 401.92 | 1.59E-3 | -0.72 | 0.60 | 3.50E-3 |
 | 4 ††| 32.69 | 5.23E-3 | 0.14 | 3.31 | 4.21E-3 |
 | 5 ††| 27.10 | 7.30E-3 | 0.65 | 5.43 | 4.57E-4 |
 | mean | 265.43 | 3.70E-3 | 0.04 | 2.92 | 3.59E-3 |
 | SD** | 245.59 | 2.50E-3 | 0.66 | 1.74 | 3.42E-3 |
peak | 1 | 39.41 | 2.55E-4 | 0.04 | 4.59 | 2.26E-2 |
 | 2 | 39.87 | 2.90E-4 | 0.18 | 1.12 | 1.14E-3 |
 | 3 | 37.51 | 8.42E-4 | 0.22 | 2.68 | 7.56E-3 |
 | 4 | 37.59 | 8.41E-4 | 0.22 | 2.21 | 1.13E-3 |
 | 5 | 41.39 | 2.24E-4 | 0.86 | 2.45 | 1.06E-2 |
 | mean | 39.15 | 4.90E-4 | 0.30 | 2.61 | 8.61E-3 |
 | SD** | 1.64 | 3.21E-4 | 0.32 | 1.26 | 8.83E-3 |