Skip to main content

Table 1 The performance of SVM models developed using different types of compositions. These models were trained and tested on DNAset, a dataset of DNA-binding and non-binding protein domains/chains.

From: Identification of DNA-binding proteins using support vector machines and evolutionary profiles

Composition Type

Threshold

Sensitivity

Specificity

Accuracy

MCC

Amino Acids

0.3

78.11

80.80

79.80

0.58

Dipeptides

0.0

73.35

77.60

76.01

0.50

4-parts amino acids

0.0

77.45

77.60

77.53

0.54

PSSM

0.1

86.32

86.80

86.62

0.72