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Table 1 Protein-protein interactions predicted by four methods

From: InPrePPI: an integrated evaluation method based on genomic context for predicting protein-protein interactions in prokaryotic genomes

Method

Number of PPIs

Number of proteins involved

Average degree

Number of PPIs covered by two methods

    

PPM

GCM

GFM

GNM

PPM

45,437

2,124

21.4

    

GCM

2,437

2,102

1.2

449

   

GFM

6,728

1,254

5.4

1,532

134

  

GNM

3,595

3,901

0.9

300

1,155

124

 

Totala

54,911

4,040

13.6

    
  1. aNumber of non-redundant PPIs predicted by the four methods.
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BMC Bioinformatics

ISSN: 1471-2105

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