Old Annotation
|
New Annotation
|
---|
Description Type
|
#Reporters
|
#Ens ID
|
#SP ID
|
% Annotated
|
Riken cDNA
| 9,759 | 2,937 | 2,008 | 50.7% |
ESTs
| 369 | 173 | 132 | 82.7% |
Hypothetical
| 348 | 173 | 52 | 64.7% |
CDNA
| 640 | 325 | 200 | 82.0% |
Gene Model
| 734 | 271 | 90 | 49.2% |
Gene Trap Library
| 48 | 13 | 15 | 58.3% |
Intronic
| 1,408 | 146 | 285 | 30.6% |
Similar to
| 748 | 273 | 154 | 57.0% |
Unknowns
| 7,849 | 1,156 | 1,448 | 33.2% |
DNA Segments
| 270 | 110 | 127 | 87.8% |
Clones
| 213 | 39 | 37 | 35.7% |
TOTAL
| 22,386 | 5,616 | 4,548 | 45.4% |
- This table categorizes all originally less-informative feature descriptions on the Agilent G2519A Option 2 Mouse Development array (22,386) into several groups. After BLASTing their corresponding sequences against either cEMBL or EnsEMBL, we were able to relate 10,164 (45.4%) features to an improved description. For the "unknown" category more than half of the features now have an improved annotation. Of those, more than half refer to known proteins.
- SP, SwissProt/UniProt; Ens, EnsEMBL