Table 1 Information of all the trained states
From: An evolutionary method for learning HMM structure: prediction of protein secondary structure
state | AA | H-phobic | H-philic | G | P | |
|---|---|---|---|---|---|---|
state0 | H | 1.4% | 77.8% | 21.7% | 0.5% | 0.0% |
state1 | H | 1.3% | 65.3% | 24.6% | 8.6% | 1.5% |
state2 | H | 0.9% | 80.1% | 14.2% | 4.8% | 0.9% |
state3 | H | 1.3% | 64.6% | 27.4% | 7.4% | 0.6% |
state4 | E | 2.1% | 36.6% | 53.2% | 4.8% | 5.5% |
state5 | E | 0.5% | 70.3% | 28.8% | 0.2% | 0.7% |
state6 | E | 2.1% | 90.4% | 9.2% | 0.3% | 0.1% |
state7 | E | 1.7% | 92.7% | 1.5% | 5.5% | 0.3% |
state8 | E | 1.6% | 48.5% | 47.8% | 3.3% | 0.5% |
state9 | E | 1.7% | 84.8% | 10.8% | 3.8% | 0.6% |
state10 | x | 2.8% | 82.2% | 17.8% | 0.0% | 0.0% |
state11 | x | 2.8% | 8.7% | 50.8% | 12.8% | 27.7% |
state12 | H | 0.9% | 16.3% | 79.4% | 1.8% | 2.5% |
state13 | H | 0.7% | 53.8% | 44.9% | 1.2% | 0.2% |
state14 | H | 0.9% | 86.1% | 13.8% | 0.0% | 0.0% |
state15 | x | 10.5% | 26.1% | 50.7% | 10.1% | 13.1% |
state16 | x | 2.9% | 24.9% | 45.9% | 16.3% | 13.0% |
state17 | H | 1.5% | 27.1% | 62.8% | 7.7% | 2.3% |
state18 | H | 1.5% | 35.7% | 59.3% | 5.0% | 0.0% |
state19 | E | 1.0% | 28.1% | 56.2% | 6.2% | 9.5% |
state20 | E | 1.5% | 66.4% | 27.3% | 5.1% | 1.2% |
state21 | E | 1.1% | 11.8% | 75.0% | 11.0% | 2.2% |
state22 | H | 2.2% | 97.8% | 2.1% | 0.1% | 0.0% |
state23 | H | 2.2% | 43.2% | 51.1% | 5.5% | 0.1% |
state24 | H | 1.2% | 92.4% | 6.8% | 0.7% | 0.1% |
state25 | H | 1.2% | 38.9% | 60.1% | 0.8% | 0.2% |
state26 | H | 1.2% | 19.3% | 79.0% | 1.7% | 0.0% |
state27 | E | 2.4% | 62.0% | 33.0% | 4.9% | 0.1% |
state28 | x | 2.0% | 24.7% | 54.8% | 12.6% | 7.9% |
state29 | x | 2.0% | 29.6% | 45.0% | 17.1% | 8.4% |
state30 | H | 1.3% | 75.4% | 20.8% | 3.7% | 0.0% |
state31 | x | 4.6% | 22.5% | 63.0% | 6.1% | 8.5% |
state32 | H | 1.8% | 20.2% | 45.7% | 10.5% | 23.5% |
state33 | E | 1.0% | 63.2% | 33.7% | 2.3% | 0.8% |
state34 | E | 1.0% | 95.4% | 2.9% | 1.7% | 0.0% |
state35 | E | 1.0% | 18.0% | 65.5% | 11.0% | 5.5% |
state36 | x | 1.6% | 23.6% | 65.9% | 7.4% | 3.1% |
state37 | x | 1.4% | 3.5% | 40.3% | 53.7% | 2.5% |
state38 | x | 1.6% | 30.0% | 57.4% | 11.2% | 1.4% |
state39 | H | 1.7% | 15.7% | 71.9% | 2.8% | 9.6% |
state40 | H | 1.7% | 27.8% | 67.1% | 2.7% | 2.3% |
state41 | H | 1.5% | 76.5% | 21.0% | 2.6% | 0.0% |
state42 | H | 1.4% | 58.7% | 40.8% | 0.2% | 0.2% |
state43 | E | 2.0% | 60.4% | 34.5% | 5.1% | 0.0% |
state44 | E | 2.0% | 30.5% | 57.0% | 5.6% | 6.9% |
state45 | x | 0.6% | 0.6% | 35.1% | 64.3% | 0.0% |
state46 | x | 0.6% | 77.6% | 19.4% | 0.0% | 2.9% |
state47 | x | 0.6% | 14.6% | 71.2% | 2.1% | 12.2% |
state48 | H | 3.6% | 21.9% | 74.3% | 3.0% | 0.7% |
state49 | H | 3.5% | 62.1% | 34.9% | 3.0% | 0.1% |
state50 | x | 4.7% | 51.4% | 32.0% | 12.9% | 3.7% |
state51 | x | 3.2% | 27.6% | 57.0% | 15.4% | 0.0% |