From: SEARCHPATTOOL: a new method for mining the most specific frequent patterns for binding sites with application to prokaryotic DNA sequences
Meme
Searchpattool
Run times
2
1
Number of site per sequence
zoops
anr
No
Minimum support
no
60%
Pattern length input
Maximum T*
Maximum T
Number of outputs
40
1000 best zs-sup Ordered by p-value + and support - Limited to 40