Skip to main content

Table 5 Test2 setting parameters

From: SEARCHPATTOOL: a new method for mining the most specific frequent patterns for binding sites with application to prokaryotic DNA sequences

 

Meme

Searchpattool

Run times

2

1

Number of site per sequence

zoops

anr

No

Minimum support

no

60%

Pattern length input

Maximum T*

Maximum T

Number of outputs

40

1000 best zs-sup Ordered by p-value + and support - Limited to 40

  1. *T = L + 20%L