Benchmarking consensus model quality assessment for protein fold recognition

BMC Bioinformatics

Table 6 Calculated p-values for Wilcoxon signed rank sum tests (MaxSub)

The different MQAP methods are compared in terms of the observed model quality of the top ranked models for each target. H₀ = m_x≤ m_y, H₁ = m_x> m_y, where H₀ is the null hypothesis; H₁ is the alternative hypothesis; m_xis the observed model quality of models selected by Method x and m_yis the observed model quality of models selected by Method y according to the MaxSub score. * The MQAP scores for these methods were downloaded from CASP7 website; all other MQAP methods were run in house during the CASP7 experiment. † MQAP methods which rely on the comparison of multiple models or additional information from multiple servers; all other methods are capable of producing a single score based on a single model.

ISSN: 1471-2105