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Table 1 Storage space requirements results

From: How to decide which are the most pertinent overly-represented features during gene set enrichment analysis

 

Cellular Components

Molecular Functions

Biological Processes

Combined

explicit size in MU (figure 1b)

48, 862

32, 187

72, 947

154, 839

generic size in MU (figure 6)

16, 611

15, 734

20, 317

41, 136

ratio generic/explicit

34%

49%

28%

27%

  1. Summary of the results obtained for the 3 Gene Ontology branches extracted neighborhoods (CC, Cellular Components; MF, Molecular Functions; BP, Biological Processes) in terms of space requirements in memory units (MU, e.g. 1 MU = 32 bits) for the explicit (sets compositions are stored) versus the generic representation of neighborhoods.
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BMC Bioinformatics

ISSN: 1471-2105

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