Mining and state-space modeling and verification of sub-networks from large-scale biomolecular networks

BMC Bioinformatics

Table 3 The ARP2/ARP3 community

Protein	Alias	Description	Rank
YLR111w	YLR111w	hypothetical protein
YIL062c	ARC15*†	subunit of the Arp2/3 complex	1
YLR370c	ARC18*	subunit of the Arp2/3 complex	4
YKL013c	ARC19*†	subunit of the Arp2/3 complex	3
YNR035c	ARC35*	subunit of the Arp2/3 complex	5
YBR234c	ARC40*†	Arp2/3 protein complex subunit, 40 kilodalton	6
YDL029w	ARP2*†	actin-like protein	2
YJR065c	ARP3*	actin related protein
YJL095w	BCK1†	ser/thr protein kinase of the MEKK family
YPL084w	BRO1	required for normal response to nutrient limitation
YBR023c	CHS3†	chitin synthase III
YNL298w	CLA4†	ser/thr protein kinase
YNL084c	END3†	required for endocytosis and cytoskeletal organization
YBR015c	MNN2	type II membrane protein
YCR009c	RVS161†	protein involved in cell polarity development
YDR388w	RVS167†	reduced viability upon starvation protein
YFR040w	SAP155†	Sit4p-associated protein
YBL061c	SKT5†	protoplast regeneration and killer toxin resistance protein
YNL243w	SLA2†	cytoskeleton assembly control protein
YHR030c	SLT2†	ser/thr protein kinase of MAP kinase family

*Proteins belonging to ARP2/3 complex listed in MIPS.
†Proteins listed in the functional category of budding, cell polarity, and filament formation by MIPS.

ISSN: 1471-2105