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Table 1 Network characteristics for PPI networks.

From: Influence of degree correlations on network structure and stability in protein-protein interaction networks

 

|V|

L

# connected components

r

FER

Rual et al.

1549

3.37

4.36

118

-0.198

0.18

Stelzl et al.

1705

3.70

4.85

44

-0.191

0.16

Ito et al. (complete)

3279

2.68

4.88

195

-0.176

0.22

Li et al. (core)

1415

2.94

4.91

70

-0.176

0.19

Yeast (DIP)

4959

6.95

4.15

31

-0.133

0.26

Ito et al. (core)

797

1.89

6.14

143

-0.112

0.35

Uetz et al.

1005

1.80

7.49

177

-0.088

0.40

E. coli (DIP)

1840

6.44

3.80

346

-0.086

0.12

D. mela . (DIP)

7451

6.08

4.39

62

-0.081

0.24

Batada et al.

2998

6.18

4.90

101

-0.047

0.37

LaCount et al.

1308

4.20

4.26

23

-0.025

0.31

Human (DIP)

1085

2.48

6.77

126

-0.004

0.36

Giot et al.(core)

4651

2.01

9.43

591

0.023

0.46

  1. This table shows several network characteristics for the protein-protein interaction networks. Shown are the number of nodes |V|, the average degree k ¯ MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaacuWGRbWAgaqeaaaa@2E23@ , the characteristic path length L, the number of connected components, the correlation coefficient r and the fraction of edges remaining (FER) after deleting the 10% nodes with the highest degree. Networks are sorted according to correlation coefficient.