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Figure 2 | BMC Bioinformatics

Figure 2

From: Exploring inconsistencies in genome-wide protein function annotations: a machine learning approach

Figure 2

Comparison of UniProt annotations of mouse protein kinase sequences with annotations from AmiGO or predicted by HDTree. The bar charts illustrate the number of proteins that were in agreement (blue)/disagreement (red) with the annotations found in UniProt. Proteins that belong to each of the three functional classes found in the UniProt records are represented by two bars. The blue bar represents the number of proteins in which UniProt and the given method share the same annotation (agreement) for that function. The red bar represents the number of proteins in which UniProt and the given method have different annotations (disagreement) for that function. a. AmiGO vs. UniProt annotations b. HDTree predictions vs. UniProt annotations [see Additional files 3 and 4].

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