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Table 2 Percentage of CAC-rich 3'-UTRs in vertebrate genes.

From: 3'-UTR SIRF: A database for identifying clusters of short interspersed repeats in 3' untranslated regions

CAC 5–7 mer

Zebrafish (7965)

Frog (8406)

Mouse (16,594)

Human (20,924)

P < 10 -7

43

0

64

0

125

1

149

0

 

0.5%

0.8%

0.7%

0.7%

P < 10 -6

85

0

107

0

278

5

298

1

 

1.1%

1.3%

1.7%

1.4%

P < 10 -5

178

3

212

15

654

36

779

16

 

2.2%

2.5%

4.0%

3.7%

P < 10 -4

496

49

593

105

1723

263

1895

221

 

6.2%

7.1%

10.4%

9.1%

  1. Numbers in parentheses to the right of each species indicate the total number of genes analyzed. Numbers above percentages indicate the number of real (left) and random (right) 3' UTRs that contain at least one cluster of CAC motifs with the indicated P-value.