Figure 1
From: The utility of MAS5 expression summary and detection call algorithms
A comparison of fold changes found by RMA and MAS5 for MCF7 and MCF10a cell line data. Absent-flagged probesets show significant disagreement between the two algorithms. First panel: all data. Remaining panels are separated by detection calls. AA: probesets flagged Absent by MAS5 detection call. PA: probesets flagged Absent in one cell line, Present in the other. PP: probesets flagged Present in both cell lines. Lines represent 2-fold thresholds (data are on a log2 scale). Details of Present/Absent flagging can be found in Methods.