Figure 1
From: Accurate multiple sequence-structure alignment of RNA sequences using combinatorial optimization
Comparison between sequence and sequence-structure alignments. Comparison between sequence-based (upper, computed by the CLUSTALW program [60]) and sequence-structure-based alignment (lower, computed by LARA, an implementation of our new approach). The left and right consensus structures are based on the ClustalW and LaRA alignment, respectively (consensus structures generated using RNAalifold [11]).