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Table 5 False positive in data set HCC-1937. Average number of false positives at various tolerances found in the data set HCC-1937. The average is evaluated from the three samples composing the data set HCC-1937.

From: The EIPeptiDi tool: enhancing peptide discovery in ICAT-based LC MS/MS experiments

 

Mass tolerance: 100 ppm

Mass tolerance: 50 ppm

Mass tolerance: 30 ppm

Mass tolerance: 15 ppm

RT tolerance: 5 min

24.7

17.0

10.3

3.3

RT tolerance: 3 min

13.7

10.7

6.3

1.7

RT tolerance: 1.5 min

9.0

7.3

4.0

0.3

RT tolerance: 0.75 min

3.3

3.0

1.0

0.3